Page:Principles of Computational Biology Lecture 11, Phylogenetic trees.pdf/20

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Ordered characters and perfect phylogeny

   Assume that we in the last common ancestor all characters had state 0.
   This assumption makes sense for many characters, for example genes.
   Then compatibility criterion is even simpler: characters are compatible if and only if there do not exist three taxa containing combinations (1,0),(0,1),(1,1)