Page:Principles of Computational Biology Lecture 11, Phylogenetic trees.pdf/8

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Version parsimony models:

   Character states
  Binary: states are 0 and 1 usually interpreted as presence or absence of an attribute (eg. character is a gene and can be present or absent in a genome)
  Multistate: Any number of states (Eg. Characters are position in a multiple sequence alignment and states are A,C,T,G.
   Type of changes:
  Characters are ordered (the changes have to happen in particular order or not.
  The changes are reversible or not.